Identification of DNA probes that reveal polymorphisms among closely related <Emphasis Type="Italic">Phaseolus vulgaris </Emphasis> lines
نویسندگان
چکیده
Analyses of genetic diversity within populations could be of great benefit to plant genetic resources conservation . In order to identify genetic markers that are variable within populations, the genome of Phaseolus vulgaris was screened with several DNA sequences in order to identify hypervariable sequences . Polymorphisms were observed between Middle American and Andean cultivars using the protein III tandem repeat of the M13 phase and the 33.15 human minisatellite . Extensive differences were observed when the DNA of two divergent lines BAT93 and Jalo EEP558, of Middle American and Andean origin, respectively were digested with Hinfl, Tagl, HaeI11 and hybridized with the 33 .15 human minisatellite. Similarly, numerous polymorphisms were observed when the M13 protein III tandem repeat region was hybridized with Tagl digests of these cultivars. Polymorphism was also detected among sister lines of two F6 backcross materials involving Middle American and Andean lines when genomic DNA was digested with TaqI and hybridized with M13 tandem repeat region . In addition, polymorphism was observed among Porrillo cultivars that resulted from selection within a single landrace population. Whereas only one isozyme difference had been observed previously among the Porrillo cultivars, eleven restriction fragments detected by the M13 protein III tandem repeat sequence differentiated these cultivars .'Ribosomal DNA also hybridized to several polymorphic bands on TaqI and EcoRI genomic Southern blots of the F6 backcross material . Only one polymorphism was observed with EcoRI-digested genomic DNA of BAT93 and Jalo EEP558 was hybridized with microsatellite (GACA)4. This probe might be useful in ascertaining relationships at the species and subspecies level, and as a marker in mapping studies . Our results show that both the human 33 .15 minisatellite and M13 should be useful probes to detect within-population variability in common bean . 177
منابع مشابه
Evolution of genetic diversity during the domestication of common-bean (<Emphasis Type="Italic">Phaseolus vulgaris</Emphasis> L.)
M13 DNA fingerprinting was used to determine evolutionary changes that occurred in Latin American germ plasm and USA cultivars of commonbean (Phaseolus vulgaris L.) during domestication. Linkage mapping experiments showed that M13-related sequences in the common-bean genome were either located at the distal ends of linkage groups or that they were unlinked to each other or to any previously map...
متن کاملRFLP diversity of common bean (Phaseolus vulgaris) in its centres of origin.
Eighty-five wild and cultivated accessions of common bean (Phaseolus vulgaris L.), representing a wide geographic area in the centres of domestication were tested for restriction fragment length polymorphisms (RFLPs). Genomic DNA was digested with one of three restriction enzymes (EcoRI, EcoRV, and HindIII) and hybridized to 12 probes distributed throughout the common bean genome. Accessions co...
متن کاملThe use of a non-coding region of chloroplast DNA in phylogenetic studies of the subtribe <Emphasis Type="Italic">Sonchinae </Emphasis> ( <Emphasis Type="Italic">Asteraceae </Emphasis>: <Emphasis Type="Italic">Lactuceae </Emphasis>)
The systematic utility of sequences from a non-coding region of chloroplast DNA (cpDNA) between psbA and trnH (6v6) was examined by assessing phylogenetic relationships in subtribe Sonchinae (Asteraceae: Lactuceae). Primers constructed against highly conserved regions of tRNA genes were used for PCR amplification and sequencing. The psbA-trnH intergenic spacer contains several insertions and de...
متن کاملProline metabolism in response to nitrogen deficiency in French Bean plants (<Emphasis Type="Italic">Phaseolus vulgaris</Emphasis> L. cv Strike)
The objective of the present work was to determine the impact of nitrogen deficiency on proline metabolism in French Bean plants (Phaseolus vulgaris L. cv. Strike). The nitrogen was applied to the nutrient solution in the form of NH4NO3 at 1.45 mM (N1), 2.90 mM (N2) and 5.80 mM (N3, optimal level). Our results indicate N deficiency is characterised by a decline in proline accumulation both in t...
متن کاملA molecular marker-based linkage map of Phaseolus vulgaris L.
A seed and flower color marker (P), nine seed protein, nine isozyme and 224 restriction fragment length polymorphism marker loci were used to construct a linkage map of the common bean, Phaseolus vulgaris L. (n = 11). The mapping population consisted of a backcross progeny between the Mesoamerican breeding line 'XR-235-1-1' and the Andean cultivar 'Calima'; the former was used as the recurrent ...
متن کامل